Molecular Biology Course III 8

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Chromatin compaction wrapping DNA about histone cores to form nucleosome
Accomplishes part of the compaction necessary to fit the long eukaryotic DNA into the nucleus
However much of the chromatin in the nucleus is
Even more highly compacted
The next stage in compaction involves
Folding the beaded fiber into thicker fiber
These fibres may be further folded on themselves to make
Thicker chromatin fibres visible in both metaphase chromosomes and nuclei of non dividing (interphase) cells
Metaphase scaffolding dye staining of metaphase chromosome from a particular organism
Gives a reproducible banding pattern
In situ hybridisation methods show that
Particular DNA sequence are always located at the same places in specific chromosomes
Some kind of regular folding
Must preserve this order
Recent evidence indicates that when
Metaphase chromosomes are treated with polyanions to strip off histones and loosely bound non histone proteins
The DNA strands emerge as enormous loops
From a scaffold to tightly bound protein
Individual loops may range up to
100000 bp in length....about the size of glob in gene cluster
For eg appx 1000 such loops exist in the
Average chromosome
Interphase scaffolding evidence also exists for a similar but more
Diffuse scaffold in the interphase nucleus
Removal of histones and weekly bound non histone proteins from intact nuclei by
High salt conc or detergents
Together with digestion of most of the DNA by nucleases
Leaves a protein structure that has been called nuclear scaffold or nuclear matrix
It includes the laminar shell that lines inside of the
Nuclear membrane